Insertion junction: CLIP2.034275_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034275
Chromosome:chromosome 11
Location:3590286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGTCGCTGCTGCAGCAGTTGCCGCCGGCTGGAGGGCTGGAGCTGATG
Internal bar code:TATACAAGGTTCCGGATTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTGTGTAAGTAGTGCGC
Suggested primer 2:CACATACACGCATGCCCATG