Insertion junction: CLIP2.034281_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034281
Chromosome:chromosome 12
Location:3137178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500700 LCL2 (1 of 125) IPR001841 - Zinc finger, RING-type; Long-chain-fatty-acid-CoA ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACACATCCGCACGCACACACACGCATCCCCCCCCACACCCTGGAGCC
Internal bar code:TTCGATGCCGCTTTATGAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2624
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGAGGACTTCCCAGCAC
Suggested primer 2:CGGACTTCCAGTGAACCTCC