Insertion junction: CLIP2.034291_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034291
Chromosome:chromosome 12
Location:4766921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523150 PFD5 Prefoldin alpha subunit; (1 of 1) K04797 - prefoldin alpha subunit (pfdA, PFDN5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGACTTGATGGGGTGTGGGGCGGGTCAGCTTGGCATGTGCCTCCAGT
Internal bar code:TAGTCTTCTATACGAGTGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAACCACTGGCTTGCAAC
Suggested primer 2:AGAAGTCCGTGGAGCAACTG