Insertion junction: CLIP2.034293_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034293
Chromosome:chromosome 1
Location:2691540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016250 MLO3,MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATATGAAGGCAGTCGCGCCTCACGCATACAATTCCACCGCATCGCAT
Internal bar code:GATGATTTGTTTTGGGGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2160
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATCTGGGTCAGACAGG
Suggested primer 2:ATGTGTGTGTTGGTGTGGGT