Insertion junction: CLIP2.034301_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034301
Chromosome:chromosome 3
Location:7428148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206000 (1 of 1) PTHR16301//PTHR16301:SF2 - IMPACT-RELATED // PROTEIN IMPACT HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACCAGAACCCCGGTCCGCATCATACCGTAATGCAGGCACCCAATGAT
Internal bar code:GTTCGATGGATTTAAGGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAGCCACTCCACGAACT
Suggested primer 2:CAGCAGGTCGACATCCCTTT