Insertion junction: CLIP2.034302_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034302
Chromosome:chromosome 6
Location:4842842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGATTTTGCGTGGATCGACACGGCGGATTCCCCCGGCTTCCGCCGA
Internal bar code:TATGGTTGAGTATAGACATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3910
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCCCTGCTACTCTGCG
Suggested primer 2:TACCGGTAGGACAGCTCCAA