Insertion junction: CLIP2.034306_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034306
Chromosome:chromosome 17
Location:2008643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710700 (1 of 4) PTHR23257:SF490 - DUAL SPECIFICITY PROTEIN KINASE SHKE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCAGTGCTGTCGCTGTCCTCCGGGACCCCGCTGCTCCGGGCGCCAG
Internal bar code:GCGGGCAACGTTGGTCCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1772
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGGCGCTAACCATGAGC
Suggested primer 2:CACCCCTCGTATGTAAGCCC