Insertion junction: CLIP2.034307_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034307
Chromosome:chromosome 16
Location:6374701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675600 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTAGGTCGACACCGGCAGGACCGTGGGCATGCCGTGGCGGCGCGTCG
Internal bar code:CCCGGAGTTCGGGGCTTTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4066
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACACCGATATAGACGCA
Suggested primer 2:CTTTCCAGCGCTTCCTCCAT