Insertion junction: CLIP2.034308_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034308
Chromosome:chromosome 1
Location:4999425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034650 (1 of 1) K03352 - anaphase-promoting complex subunit 5 (APC5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACACAGAGGGCATAG
Internal bar code:AATCTAAGTTGTGAGTATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACACACACCCCAG
Suggested primer 2:CTGCAAGCAACCACCTTGAC