Insertion junction: CLIP2.034310_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034310
Chromosome:chromosome 12
Location:9778397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549852 (1 of 14) IPR002198//IPR002347 - Short-chain dehydrogenase/reductase SDR // Glucose/ribitol dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACGCCAATCGACATCCACTCGCATCCACCCCTGGGCAATCATGCAGC
Internal bar code:TCTAGCGCTGATTGGGGTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:34.8837
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTGTGGTGAACATGC
Suggested primer 2:CTTCACAGCCACCATGTTGC