Insertion junction: CLIP2.034310_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034310
Chromosome:chromosome 12
Location:9778434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549852 (1 of 14) IPR002198//IPR002347 - Short-chain dehydrogenase/reductase SDR // Glucose/ribitol dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAACACAGGGGCATTGGTTTAAGCCTTGTAAAGGGCTTCCTGGCGCGA
Internal bar code:TCTAGCGCTGATTGGGGTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACAGCCACCATGTTGC
Suggested primer 2:GTGTGGTGTGGTGAACATGC