Insertion junction: CLIP2.034312_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034312
Chromosome:chromosome 10
Location:798827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423050 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACCCTGAAGGAGGGTGGATCTGGGGCAATAGTTCAGCGCTGAGCCCCG
Internal bar code:CTTAAACTAGCTGTAGGTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCTTGGTATGCGAGTT
Suggested primer 2:ACTTCTGTCAGTGTCGGCAG