Insertion junction: CLIP2.034313_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034313
Chromosome:chromosome 5
Location:2172406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237250 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGCTCAGCTGTATAGCTCAGATGCAAGGAGCGTGTACGTGCAAGGG
Internal bar code:ACCACAATCATGACATCGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3702
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTACCCCTACGTACCC
Suggested primer 2:GTTGTGGTCTCCTGGTCCAG