Insertion junction: CLIP2.034316_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034316
Chromosome:chromosome 7
Location:1901453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATCTGCATCGTGTGCGCACCGTGTGTGTAGGAAGGGGGATTGTATA
Internal bar code:GGGGGATCTTGGGACACCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGAGGGAGAGAGGGG
Suggested primer 2:TGTGGTCGCCATAACTTCCC