Insertion junction: CLIP2.034333_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034333
Chromosome:chromosome 17
Location:1191196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704600 (1 of 1) PTHR21346:SF0 - PROTEIN T06D8.7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCTTAAACGCCCGCAGGCGGCCCTGAGCAGGGCCCTTCCGGTGGCA
Internal bar code:GAAGTTATTCCAGAGATCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1943
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGACAAACCGAGCTCAT
Suggested primer 2:GCACGGTTTATCGGAATGGC