Insertion junction: CLIP2.034343_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034343
Chromosome:chromosome 5
Location:33385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCAAAGCGAGATTTCGACCTTGAGCGAACACGTCAGCTGGGCAAGC
Internal bar code:CTTGGTTCTAGCCGTGTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCCCTATCGAGCCTTGA
Suggested primer 2:ACAACCACTCGTGCAAATGC