Insertion junction: CLIP2.034349_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034349
Chromosome:chromosome 17
Location:2700960
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g717200 (1 of 1) PTHR10060:SF24 - DEOXYRIBONUCLEASE TATDN3-RELATED intron
Cre17.g717250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACTAGTGCGGACAGGTAGGAGCGCACGGGCAGCCTGGGGCAGCGGG
Internal bar code:TTTTGACACCGCTAGGTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACGCAGTTTCTCTGAC
Suggested primer 2:CTGAGAACGTCTGCTCGTGT