Insertion junction: CLIP2.034353_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034353
Chromosome:chromosome 1
Location:6814738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTCCGCCACGCTCCGTGCGCTCTCCACCACGGCTAGCCTGTGCCCG
Internal bar code:AGCATCTCATTTAACAACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTTGGTACTGACTTGCC
Suggested primer 2:AGCAGCTGGTCGTCGTTTAT