Insertion junction: CLIP2.034353_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034353
Chromosome:chromosome 1
Location:6814739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGTTGAGCGCGAGCGAGAGCGCGATCGTGAGCGTGGCGGTGGCGGC
Internal bar code:AGCATCTCATTTAACAACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCTGGTCGTCGTTTAT
Suggested primer 2:TCGGTTGGTACTGACTTGCC