Insertion junction: CLIP2.034396_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034396
Chromosome:chromosome 2
Location:3641651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCACACGACACCTACCAGCATCCGCCACTACTGTGTGTGGCACAGAG
Internal bar code:CTCAACGGTACAATTAACGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGCACCGCGATACTG
Suggested primer 2:ATGGTGCTCTGGGATTGTGG