Insertion junction: CLIP2.034401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034401
Chromosome:chromosome 10
Location:4139696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448700 (1 of 1) K11650 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D (SMARCD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCGCAGCTGGTGCCCACATGGCGCTGTGGCGCTGGTGTGTGATTTG
Internal bar code:TTTATTTGTGGCGAGTTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTTCCAATGGAAGGCT
Suggested primer 2:GGGAAGGGCTCCTTGAAGTC