Insertion junction: CLIP2.034402_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034402
Chromosome:chromosome 1
Location:5099432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCACACACGAGGCCAGGCTCAGCCGACCAGCTCCAGGGCACCGTTGC
Internal bar code:AGGGTAAGGCGGACAGTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4093
LEAP-Seq percent confirming:97.8495
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAAGCATGTCCCCAGGGA
Suggested primer 2:CTGTGTGCCTACTGAGTGCA