Insertion junction: CLIP2.034411_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034411
Chromosome:chromosome 1
Location:5238105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCAAAGAGCGCTGACATGCCCATGTCGATGACTTTCACTCGCAGCG
Internal bar code:GTTGATTTTAGAGTGACGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2827
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGAGCCCCTAAACCCTG
Suggested primer 2:GCACGCGGCTTTATTGCATA