Insertion junction: CLIP2.034416_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034416
Chromosome:chromosome 16
Location:4658693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667451 TLP3,CAV6 Tubby-like protein; (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGTGACCCCCCCCCGGCCCCCGCAGACGCTGACGCTGGAGAACTA
Internal bar code:CTTAGGATACTTAATTTGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:8.57143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCGTAGAGAGGTGTTT
Suggested primer 2:CACTGGATCGAGACGCCTAC