Insertion junction: CLIP2.034419_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034419
Chromosome:chromosome 8
Location:3558383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCGCAAAACGAGCGCGCAGGGCTAGGAACGGCCCACCGCTGTCGCA
Internal bar code:GGGGAAGCTGTTATTTATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:95.8904
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGGCTACATCCCTGGCC
Suggested primer 2:CCGCTATCGCTGCTGTAGTA