Insertion junction: CLIP2.034435_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034435
Chromosome:chromosome 1
Location:4854648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800092 (1 of 2) PTHR11825:SF24 - D-AMINOACID AMINOTRANSFERASE-LIKE PLP-DEPENDENT ENZYMES SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCCGGGCCCATCTGTCACACGTACCCTGCATTCACATCGTTGCAGTC
Internal bar code:TCTTTGTGAAATGTATACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:16.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGAAGAGGAGGATGGG
Suggested primer 2:CCACATGCGCATCGTGTTAG