Insertion junction: CLIP2.034444_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034444
Chromosome:chromosome 3
Location:8088181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCTCACACGTCTCCGTCCCCCGCAACAGGGCGTGCGACGAGGAGT
Internal bar code:AAGTCGGCCTTCGGGTGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCATGCCAAAGTCCCCTG
Suggested primer 2:CGCGCACAAGTACTTACTGC