Insertion junction: CLIP2.034444_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034444
Chromosome:chromosome 3
Location:8088182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCCCAAGACGACCTGGGCCCCGCTCACGCATGGGAGCGGAGGGGA
Internal bar code:AAGTCGGCCTTCGGGTGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCACAAGTACTTACTGC
Suggested primer 2:ATCCATGCCAAAGTCCCCTG