Insertion junction: CLIP2.034447_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034447
Chromosome:chromosome 2
Location:6100331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119500 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGGCATGCAGACTGCGATTGCGGAGTTGAAATCCAAGATGGCGAC
Internal bar code:TTAACGTAATACAGGGCGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:43.9024
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACCTAACGCACCTGGGA
Suggested primer 2:TGGGTGTCGTCATGTCCTTG