Insertion junction: CLIP2.034466_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034466
Chromosome:chromosome 14
Location:2489572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCGAAACGAGAGCGGAGCTGCTGGGGCCCACTCCTGCTCCACAAGT
Internal bar code:CGATATAATCAACGCTGCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATGAATCGGCGTGACG
Suggested primer 2:TGCCAAGGGAGAACGACTTC