Insertion junction: CLIP2.034474_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034474
Chromosome:chromosome 7
Location:2289950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327800 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCGCCGACCCTCCTGAGTCAGTTAGCAACTTTGCTTTCAGACGGTT
Internal bar code:TGGTGTGGCATTGTCGTCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2191
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACGGTCCGACAAGTCTG
Suggested primer 2:TTAGTTGCACAGACGTCGCT