Insertion junction: CLIP2.034476_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034476
Chromosome:chromosome 9
Location:3613587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396846 (1 of 2) PTHR22957//PTHR22957:SF148 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // RE26521P CDS
lncRNA_TCONS_00135978 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCTTTTGACCCATCGCATCCCACACCAATCACTTCAGCAATCAAGGA
Internal bar code:GTATAATGCGCTACGGTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCCCCGTAGCTGAAGC
Suggested primer 2:TTTGCACCACTCGCACATTG