Insertion junction: CLIP2.034483_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034483
Chromosome:chromosome 16
Location:1088460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649550 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCCACGGCGCCGGTGGTGCTGGTGCACCGGAGGCCGCGGCGTGGC
Internal bar code:CTCCTATGCATGTTTTGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1050
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTACAACTCGCAGGGG
Suggested primer 2:CTCTGGTTCTTTGCCGTTGC