Insertion junction: CLIP2.034490_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034490
Chromosome:chromosome 3
Location:1345566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGTCCACAGGCGGGGTCGTGCCCGGCTGCAAAGTAGGCGATGACATT
Internal bar code:CGGTGTGTAACGGAACTAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2263
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:CCTGCCCTCACTCTCTACCT