Insertion junction: CLIP2.034511_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034511
Chromosome:chromosome 7
Location:6345968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357157 (1 of 1) 1.14.13.99 - 24-hydroxycholesterol 7-alpha-hydroxylase / 24-hydroxycholesterol 7-alpha-monooxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGATACGGCATCCACTGGCCCGGGCCCTGCTGCCCCTGCTGCCGCT
Internal bar code:AAGGGAGGGGGTGGGGGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACCTCTACTCGCTGTG
Suggested primer 2:CGCATGCGTTGTACATCAGG