Insertion junction: CLIP2.034515_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034515
Chromosome:chromosome 8
Location:2497865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372500 (1 of 1) K11373 - elongator complex protein 1 (ELP1, IKI3, IKBKAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCATGTGGCACGCTGATACTATATTTACAAACGTATACCGTAAACC
Internal bar code:ATACGCGTAAATCTCCAACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCCCCAGACCCTATCC
Suggested primer 2:ACTTACCCGCGATAAGCCTG