Insertion junction: CLIP2.034516_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034516
Chromosome:chromosome 3
Location:4529959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800334 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGAGATGGAGGCTCAGGGCTGGGAGGGGCCGGGCTGGGGGGCAGAG
Internal bar code:GTGCAGAGGGGACCTACGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTGAGAAGTGTCACG
Suggested primer 2:GAAGGCGGATGCGGACTAG