Insertion junction: CLIP2.034523_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034523
Chromosome:chromosome 13
Location:3550000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCCGGCGCCTCCAGCCCCGCCTGCAGGCCGCTGAAAGCGGGCAGCA
Internal bar code:AAACGGTGGGGCTGTCAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2873
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGAGAGCCGTGTATGC
Suggested primer 2:GGGAAGGGTTGGTGATGAGG