Insertion junction: CLIP2.034525_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034525
Chromosome:chromosome 1
Location:1589588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008600 (1 of 1) IPR017993//IPR022751//IPR029044 - Atrophin-1 // Alpha-mannosyltransferase // Nucleotide-diphospho-sugar transferases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGGCGGGTTGGGCCGGCGGCGGCGGGAGGGAGGGCGGTTGCGGCG
Internal bar code:AAAGAGGAGCCAAACGACGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:16.129
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGATGACTACATGGCTGC
Suggested primer 2:CCACCACATACAACCCCTCC