Insertion junction: CLIP2.034533_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034533
Chromosome:chromosome 5
Location:189267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242750 (1 of 5) PTHR10795//PTHR10795:SF157 - PROPROTEIN CONVERTASE SUBTILISIN/KEXIN // MEMBRANE-BOUND TRANSCRIPTION FACTOR PEPTIDASE, SITE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCTTTCTTGCTCCTCCCACAGCACCTGTCCGCCGCCCTAGACTGGCT
Internal bar code:CCATAGTTACTCACGCAGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2160
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGGGTGTGTGTGTATG
Suggested primer 2:CCAGTGGACGAAAACGAGGA