Insertion junction: CLIP2.034537_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034537
Chromosome:chromosome 16
Location:1515686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653150 CPR3 (1 of 2) PF01841 - Transglutaminase-like superfamily (Transglut_core); Cysteine protease, transglutaminase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCATAGAACAGCGAGCGCCAGTCCTCGCGCGGCTCGTCCAGGCTCGC
Internal bar code:GTAAGGTTATGACCCTCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCATAAGCTTGCGCGA
Suggested primer 2:CAAACGGCACCCAAACAGAG