Insertion junction: CLIP2.034543_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034543
Chromosome:chromosome 7
Location:5434173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350750 PTO1,PTOX1 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGGGTGGGCGTTATGGCGCAACACCCTCCCGCCACTCCACCTGGCG
Internal bar code:GGTGAGGACTTACGTGTAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCCTCGCCAATCCTTT
Suggested primer 2:CTCAGAGCCACGAAAACCCT