Insertion junction: CLIP2.034548_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034548
Chromosome:chromosome 4
Location:471064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217922 (1 of 1) K10601 - E3 ubiquitin-protein ligase synoviolin (SYVN1, HRD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCACCATCCCGCCGCCCTTTGCCGGCGGGCTGGGCGCCGCGACGGC
Internal bar code:GAGTGTTTCTCTGCCACGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3130
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGGTGGTGATGCAAC
Suggested primer 2:GCCGGCTATCAAGGAGATCC