Insertion junction: CLIP2.034549_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034549
Chromosome:chromosome 16
Location:4262317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g669500 (1 of 726) IPR011009 - Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCTCCTCCTGCTGCGGGTACCGGCGCGCGCACACGCAACGCCACC
Internal bar code:GTAAAAACTGCTAAATATGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCAAGTGCCAAGCAAG
Suggested primer 2:TGATGAACACGACCACCAGG