Insertion junction: CLIP2.034552_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034552
Chromosome:chromosome 10
Location:886371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423800 KU80 (1 of 1) K10885 - ATP-dependent DNA helicase 2 subunit 2 (XRCC5, KU80, G22P2); ATP-dependent DNA helicase 2 subunit KU80 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGAATTCGAGAGTGTCAACTCGGGTGCTTGCACCCCCACGCCGCTCC
Internal bar code:GGGGCCATTGTCCTATCAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1687
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGGTGTGGATGACATGA
Suggested primer 2:GTAGCTGATTCGGAGGTCGG