Insertion junction: CLIP2.034553_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034553
Chromosome:chromosome 10
Location:1762229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN CDS
Cre10.g801118 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGCTGGAGGCGGCGCAGGCGCTGTTCCGCGAGGCGGGCTGCCCGGA
Internal bar code:TGCGTTGCCCGGAGGTTGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGGGGGAGGGGTGATAC
Suggested primer 2:ATGCGCACATCCTTCACTCA