Insertion junction: CLIP2.034569_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034569
Chromosome:chromosome 5
Location:1945379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTACTCCGTCTCGCATTCCCAAGCTCGGCGCCGCCGCAGGCAGCGC
Internal bar code:GGCTCGTCGGATTTACTAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1646
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCTTCTCCTCCTCCAG
Suggested primer 2:AGGTGAGTCTCGCTGTGTTG