Insertion junction: CLIP2.034577_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034577
Chromosome:chromosome 12
Location:5965207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCGGCCCACTCCGCATCGGTGAGGCCCGACGCGGCCCTGCAACTGG
Internal bar code:GCGTAAGTTTCGGGTGTTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2523
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATACCAGGAACGTGACT
Suggested primer 2:CATCGTTTCCGTCCGATTGC