Insertion junction: CLIP2.034583_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034583
Chromosome:chromosome 3
Location:7555266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCAGCTGCATGTGCCGCTAGCTTCTCGGGCCCCCACCACGGTGTCTG
Internal bar code:ACGGATCTTCCGCTTCGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5500
LEAP-Seq percent confirming:95.6897
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTCCTTGCCATTTCGCA
Suggested primer 2:CCGACGTATAGTCCAGTGCC