Insertion junction: CLIP2.034584_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034584
Chromosome:chromosome 1
Location:2494724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800047 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCCGCGGCGCTTAAGAGAAGCCCTTCGTGCTGGCACGGCTCACCTGT
Internal bar code:ACAACTAGGTATTATGAGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:796
LEAP-Seq percent confirming:40.4762
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGCGCGTTCATAATTC
Suggested primer 2:GAGCGTGCAACAAACGAGTT